gatk's GenotypeGVCFs always gives an error when analyzing full exon data of.g.vcf.gz form in UK biobank: The list of input alleles must contain < NON_REF> as an allele but that is not the case at position 68991; Former User of DNAx Community_66 08 March 2023 00:00 2 comments Comments 2 comments Sort by Date Votes Ondrej Klempir DNAnexus Team 09 March 2023 11:32 Could you please provide more illustrative example(s)? Screenshot, field id, gatk command... 0 Chai Fungtammasan DNAnexus Team 09 March 2023 15:27 @Gu An? It might also be more effective to ask ukbiobank-support@dnanexus.com since they could get access to your log file and project. 0 Please sign in to leave a comment.
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Could you please provide more illustrative example(s)? Screenshot, field id, gatk command...
@Gu An? It might also be more effective to ask ukbiobank-support@dnanexus.com since they could get access to your log file and project.
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