How to create an applet with the "feature" IMAGE_PROCESSING (i.e., FSL, Nipype, FreeSurfer) automatically loaded? Is this possible? I know how to load a JupyterLab instance, but was wondering if one could make an applet that automatically has these
If you want to use those program outside Jupyterlab, I recommend that it's best to run docker image that has those tools installed. The easiest way would be running Docker in Swiss-army-knife.
Comments
1 comment
If you want to use those program outside Jupyterlab, I recommend that it's best to run docker image that has those tools installed. The easiest way would be running Docker in Swiss-army-knife.
I googled and found some https://hub.docker.com/r/nipype/nipype/
https://hub.docker.com/r/vistalab/fsl-v5.0
https://miykael.github.io/nipype_tutorial/notebooks/introduction_neurodocker.html
Please be careful when using public docker though. You need to check of the source is truth worthy.
Please sign in to leave a comment.