Just wondering if there is dx commands that is equivalent to: find /path -name "*.bam" that can list all bam files with complete paths under /path directory. If not how about something like ls */*/*.bam? Thanks for help.

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  Ondrej Klempir DNAnexus Team

  • 21 February 2022 15:27

  Hi!

   

  You may want to try dx find data with three additional parameters specified, i.e. --path PROJECT:FOLDER , --name and --class file,

   

  e.g., dx find data --path myproject:/ --name "*.bam" --class file

   

  For more details, please see dx find data -h

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  Permanently deleted user

  • 21 February 2022 17:41

  Thanks you! That worked.

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