• Speed/throttling when submitting 1000s of jobs

  • Gabriel Doctor
  • 21 March 2025 16:42
  • 0 votes
  • 2 comments

• Importing nextflow pipeline to the project

  • Iman Nazari
  • 31 March 2025 15:03
  • 0 votes
  • 2 comments

• Set time limit policy on dx run jobs with 'cmd' input and how to check time limits

  • Gabriele Maria Sgarlata
  • 13 May 2025 01:31
  • 0 votes
  • 1 comment

• How to avoid job failures/restarts?

  • Hannah Louise Nicholls
  • 23 January 2025 11:03
  • 0 votes
  • 3 comments

• Extraction of phenotypes from gp_clinical

  • Akhil Pampana
  • 15 May 2025 15:40
  • 1 vote
  • 0 comments

• Getting INFO scores for .bgen files

  • Alexandra Baousi
  • 15 May 2025 15:34
  • 0 votes
  • 0 comments

• Instance fails mid execution with errors

  • Madhuri Sudharshan Gota
  • 14 May 2025 20:41
  • 0 votes
  • 0 comments

• Table exporter job fail

  • Jeffrey Wang
  • 04 March 2025 06:30
  • 0 votes
  • 1 comment

• SNP filtering for genomic regions

  • Ian Meneghel Danilevicz
  • 29 April 2025 10:28
  • 0 votes
  • 3 comments

• Complete microsatellites / STRs

  • Mahdi Moqri
  • 24 March 2025 22:08
  • 0 votes
  • 1 comment

• How to determine the end of the follow-up period, I do not understand how the end of the follow-up period similar to September 30, 2021 mentioned in many articles is obtained.

  • alex
  • Edited 27 April 2025 06:50
  • 0 votes
  • 1 comment

• About the participant ID in the same project

  • Zhengrong Xu
  • 09 May 2025 04:47
  • 0 votes
  • 1 comment

• DRAGEN WGS BGEN files use 16-bit probabilities that are incompatible with Hail

  • Andrew Magis
  • 10 April 2025 16:30
  • 0 votes
  • 1 comment

• Importing samtools on JupyterLab

  • Kent Small
  • Edited 17 April 2025 16:43
  • 0 votes
  • 1 comment

• Number of sites removed by ukb23158_500k_OQFE.90pct10dp_qc_variants.txt

  • Bastien Rioux
  • 20 February 2024 09:36
  • 0 votes
  • 6 comments

• Is showcase down at the moment ?

  • Aditi Kapadia
  • 09 May 2025 10:58
  • 0 votes
  • 3 comments

• Showcase Update

  • Jay Rothery
  • 15 April 2025 09:31
  • 0 votes
  • 4 comments

• Basic UKB usage - accessing data, phenotypes and interactive analysis

  • Sebastian Marcus May-Wilson
  • 12 February 2025 09:33
  • 0 votes
  • 7 comments

• HTTPS Apps - how to access without UKB-RAP credentials?

  • Jan Bayer
  • 14 January 2025 17:06
  • 0 votes
  • 1 comment

• Disease/tissue-specific data

  • Martin Stoves
  • 05 March 2025 12:50
  • 0 votes
  • 1 comment

• 500K Dragen vcf file phasing

  • Yong Qian
  • 23 February 2025 01:00
  • 0 votes
  • 1 comment

• Proteomics - olink_data help

  • Rhiannon Mae Armitage
  • 19 February 2025 12:44
  • 0 votes
  • 1 comment

• JupyterLab Launch

  • Yilei Ge
  • 17 February 2025 02:24
  • 1 vote
  • 1 comment

• Optimising speed of extracting specific loci from WGS

  • Gabriel Doctor
  • Edited 26 November 2024 10:46
  • 0 votes
  • 1 comment

• R studio trial? Will we have to buy a license for this at some point?

  • Andrea Lisa Darling
  • 07 May 2025 05:52
  • 0 votes
  • 0 comments

• Unable to refresh RAP data due to "project not eligible for updates"

  • Elby MacKenzie
  • Edited 31 March 2025 20:03
  • 0 votes
  • 5 comments

• SNP availability for known genes

  • Helena Bird
  • 28 March 2025 14:42
  • 0 votes
  • 2 comments

• Gene mutations as a binary variable

  • Sara Nofal
  • 02 April 2025 21:22
  • 0 votes
  • 1 comment

• Opening R file in Rstudio Workbench

  • Annemieke ter Telgte
  • 29 April 2025 13:47
  • 0 votes
  • 1 comment

• dx upload replace files

  • Roberto Bonelli
  • 05 May 2025 18:07
  • 0 votes
  • 1 comment

Featured posts

• Useful links to DNAnexus UKB-RAP resources
• Query of the Week #1: Export Phenotypic Data to a File
• Performing GWAS on RAP using DX toolkit and swiss-army-knife