• Where are 2 of the mandatory courses required for UKB-RAP access? Answered

  • Janet Tang
  • 09 October 2024 19:52
  • 11 votes
  • 6 comments

• Changing the way UK Biobank data is made available to researchers around the world

  • Huma B
  • Edited 19 November 2024 14:56
  • 4 votes
  • 0 comments

• Unable to create JupyterLab snapshot

  • Markus J Ankenbrand
  • Edited 30 January 2025 10:20
  • 3 votes
  • 5 comments

• The Application is not enabled for RAP

  • Muhammad Muneeb
  • 05 December 2024 08:47
  • 3 votes
  • 6 comments

• Which RAP tools work natively with the segmentation of the genome into tiny chunks (with no index)

  • James Eales
  • 26 March 2024 00:23
  • 3 votes
  • 12 comments

• Limit to number of fields that can be exported?

  • Kendall King
  • Edited 03 March 2025 21:29
  • 2 votes
  • 0 comments

• Quality issues with DRAGEN joint variant callset

  • Ruebena Ellen Dawes
  • Edited 03 March 2025 11:08
  • 2 votes
  • 0 comments

• How do we span AWS instances with GPUs for deep learning projects?

  • Hang Yuan
  • 10 July 2024 10:19
  • 2 votes
  • 4 comments

• Moving preprocessed bulk images to the RAP

  • James C Porter
  • 08 July 2024 14:02
  • 2 votes
  • 1 comment

• Quality control and metrics Pinned

  • Lucy BG
  • 20 March 2024 16:27
  • 2 votes
  • 0 comments

• Query of the Week #1: Export Phenotypic Data to a File Pinned Featured

  • Ondrej Klempir
  • 17 February 2023 00:00
  • 2 votes
  • 39 comments

• Extraction of phenotypes from gp_clinical

  • Akhil Pampana
  • 15 May 2025 15:40
  • 1 vote
  • 0 comments

• Proteomics data values from dx extract (NPX value clarification for differential analysis)

  • John Alexander
  • Edited 15 April 2025 09:14
  • 1 vote
  • 1 comment

• documentation on DRAGEN bgen and plink release

  • Ruebena Ellen Dawes
  • 14 April 2025 14:07
  • 1 vote
  • 1 comment

• Refreshing of the project takes a long time...

  • Shiyu Zhang
  • 02 April 2025 08:41
  • 1 vote
  • 0 comments

• Clarification on Proteomic Data Analysis (Olink NPX)

  • Manal Alharbi
  • 10 March 2025 17:49
  • 1 vote
  • 0 comments

• Simple Proteomic Download

  • Ayal Mayer Yakobe
  • 04 March 2025 20:50
  • 1 vote
  • 0 comments

• Showcase currently down?

  • James C Porter
  • Edited 28 February 2025 18:36
  • 1 vote
  • 1 comment

• Best way to get date of last clinical encounter?

  • Courtney Carroll
  • 26 February 2025 22:28
  • 1 vote
  • 7 comments

• Image Processing JupyterLab not Opening

  • Nicholas Edward Souter
  • 25 February 2025 15:53
  • 1 vote
  • 4 comments

• RAP Swiss Army Knife - PLINK failed to open bed file

  • Matthieu Pluntz
  • Edited 24 February 2025 17:31
  • 1 vote
  • 0 comments

• DRAGEN SV/CNV Calls

  • Hayley Jane Power
  • 21 February 2025 16:04
  • 1 vote
  • 1 comment

• How to extract hospital inpatient and death data using table exporter?

  • Lewis Steell
  • 18 February 2025 12:09
  • 1 vote
  • 2 comments

• JupyterLab Launch

  • Yilei Ge
  • 17 February 2025 02:24
  • 1 vote
  • 1 comment

• Image viewer on UKB RAP FSLeyes / ITK-SNAP

  • Annemieke ter Telgte
  • 11 February 2025 10:36
  • 1 vote
  • 2 comments

• WDL: a bundled dependency could not be found

  • Nick Shrine
  • 28 January 2025 15:09
  • 1 vote
  • 1 comment

• Availability of APOE genotypes

  • Michael Lutz
  • 16 December 2024 16:39
  • 1 vote
  • 8 comments

• Dictionary no longer contains showcase category

  • James Pirruccello
  • 09 December 2024 00:41
  • 1 vote
  • 1 comment

• Trouble with finding diagnoses

  • Robin Kaus
  • 29 November 2024 10:13
  • 1 vote
  • 4 comments

• dx extract - possible to use UKB_FORMAT?

  • Donald M. Lyall
  • 28 November 2024 11:45
  • 1 vote
  • 0 comments

Featured posts

• Useful links to DNAnexus UKB-RAP resources
• Query of the Week #1: Export Phenotypic Data to a File
• Performing GWAS on RAP using DX toolkit and swiss-army-knife