Imaging
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Has the image_file argument been removed from dx run?
- Former User of DNAx Community_68
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Cohort Selection and Genomic & Phenotype Data Extraction - Machine Learning 1: Coffee Break".
- Permanently deleted user
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I built a cohort including T1 structural brain images. However, the actual brain data is in the bulk folder... how can I select all the participants of my cohort in the bulk folder and download the actual data?
- Permanently deleted user
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Is it possible to run the FreeSurfer longitudinal processing pipeline on the RAP for T1 brain images?
- Former User of DNAx Community_49
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Is there a way to extract the bulk imaging data using the spark jupyter notebook.
- Permanently deleted user
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Where can I save processed images from the UKB bulk data and later use them for training the network. Do we have any example for such task. Looking specifically in LIVER MRI IMAGES.
- Permanently deleted user
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Image derived phenotype output is based on segmentation - instead of including them as a number, is it possible to provide as masks? i.e annotation of specific region to RAP/UKB returning data?
- Brenton Pyle
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I used RAP tool to do a PLINK GWAS but results did not include X or XY files, only 22 autosomes. How do I include X and XY chr files.
- Former User of DNAx Community_10
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Will OCT Converter be implemented in the future? i.e the OCT iamges are *.FDS and *.FDA files
- Brenton Pyle
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