Alexandra Lee DNAnexus Team

Hi Akhil, Thanks for sharing this, it looks like its how you're defining your file path names using strings in the python notebook, which is different than bash. Hope this helps

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• 06 February 2023 17:21
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Hi Akhil,  Would you mind providing some screenshots to further clarify what you're doing/what issue you're running into. Thanks

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• 03 February 2023 20:10
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Thanks so much for sharing this Ondrej! I love that you can programmatically generate these phenotypic datasets. Alternatively, it seems that you can also use `dx extract_dataset` with a single nod...

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• 15 March 2023 18:43
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Maybe try installing your packages in an RStudio notebook using the Jupyter Lab Tool instead. The version of R used in jupyter lab is 4.2.0 (rlang version 1.0.6) instead of R in RStudio is 4.1.1 (r...

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• 09 December 2022 16:40
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This is answered in a separate post here: https://community.dnanexus.com/s/question/0D582000001ewWWCAY/could-you-please-offer-the-list-of-field-names-for-all-proteins-so-that-we-can-download-all-th...

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• 16 June 2023 16:09
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Hello, Here is a list of the field names for all proteins in "olink_instance_0" dataset: https://github.com/dnanexus/UKB_RAP/blob/main/proteomics/field_names.txt Here is a link to how you can progr...

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• 16 June 2023 15:41
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