
Former User of DNAx Community_6
Activity overview
Latest activity by Former User of DNAx Community_6
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Issue accessing hail-generated output
I am attempting to execute Hail commands for performing VEP annotations and exporting the output. Despite trying multiple iterations, I am uncertain about the destination of the output. I have been...
- Former User of DNAx Community_6
- 3 followers
- 8 comments
- 0 votes
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Issue stopping the dispensing option
Hello, I performed the dispensing dataset a few weeks ago, before the dispensing dataset issue arose. I believe the dispensing option restarted automatically afterward for the project I have perf...
- Former User of DNAx Community_6
- 2 followers
- 2 comments
- 0 votes
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Issue running bolt lmm
Hello, I am trying to run boltlmm for chromosome X and I am getting issues as below. [Image: image] I am using the latest bolt lmm tool and running in jupyter notebook with hmem1_hdd1_v2_x9...
- Former User of DNAx Community_6
- 2 followers
- 2 comments
- 0 votes
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Saige null model generation giving error when trying to do on the complete dataset
Hello, I am trying to run an analysis using Saige on a complete dataset (480k) on chromosome X. While creating a null model, I encountered a "memory not mapped" error. I have reported this error...
- Former User of DNAx Community_6
- 2 followers
- 2 comments
- 0 votes
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I have faced an issue where sample IDs are different from bgen so I had to edit a sample file and upload that for the analysis. Ur's may not be the same case, Try doing one chromosome at a time. Wh...
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Looks like a sample file is not matching. Have you encountered the same issue while running saige?
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- 0 votes
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Thank you so much for the response. I am excited for WGS data,
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- 0 votes
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Refresh of data is been in pending since last thursday
Hello, I am trying to update my refresh and Its been pending since last Thursday. May I know what could be the reason? Regards Akhil
- Former User of DNAx Community_6
- 2 followers
- 2 comments
- 0 votes
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Does anyone know how to get sample ID and batch in which proteins were quantified information?
- Former User of DNAx Community_6
- 2 followers
- 2 comments
- 0 votes
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accessing the database through SQL Spark is not working
Hello, I am trying to access the database we have using Spark to down a set of phenotypes that we are interested in. Whenever I am trying to access the database using SQL and SPARK, I get this ...
- Former User of DNAx Community_6
- 2 followers
- 3 comments
- 0 votes