Former User of DNAx Community_6
Posts
Recent activity by Former User of DNAx Community_6
-
Issue accessing hail-generated output
I am attempting to execute Hail commands for performing VEP annotations and exporting the output. Despite trying multiple iterations, I am uncertain about the destination of the output. I have been...
- 4 followers
- 9 comments
- 0 votes
-
Issue stopping the dispensing option
Hello, I performed the dispensing dataset a few weeks ago, before the dispensing dataset issue arose. I believe the dispensing option restarted automatically afterward for the project I have perf...
- 2 followers
- 2 comments
- 0 votes
-
Issue running bolt lmm
Hello, I am trying to run boltlmm for chromosome X and I am getting issues as below. [Image: image] I am using the latest bolt lmm tool and running in jupyter notebook with hmem1_hdd1_v2_x9...
- 2 followers
- 2 comments
- 0 votes
-
Saige null model generation giving error when trying to do on the complete dataset
Hello, I am trying to run an analysis using Saige on a complete dataset (480k) on chromosome X. While creating a null model, I encountered a "memory not mapped" error. I have reported this error...
- 2 followers
- 2 comments
- 0 votes
-
Refresh of data is been in pending since last thursday
Hello, I am trying to update my refresh and Its been pending since last Thursday. May I know what could be the reason? Regards Akhil
- 2 followers
- 2 comments
- 0 votes
-
Does anyone know how to get sample ID and batch in which proteins were quantified information?
- 2 followers
- 2 comments
- 0 votes
-
accessing the database through SQL Spark is not working
Hello, I am trying to access the database we have using Spark to down a set of phenotypes that we are interested in. Whenever I am trying to access the database using SQL and SPARK, I get this ...
- 2 followers
- 3 comments
- 0 votes
-
How to Access OMOP database of ukbiobank?
Hello, I am trying to check Omop database files to extract the phenotypes of my interest. May I know how to access these databases to download the updated phenotypes? Thank you so much Regards...
- 4 followers
- 18 comments
- 0 votes
-
Is there any dataset with only clinvar pathogenic variants information only?
- 2 followers
- 2 comments
- 0 votes
-
I am trying to access accelerometry data. I would like to know how to use these datasets and are there any tutorials available for the analysis ?
- 3 followers
- 6 comments
- 0 votes