Former User of DNAx Community_97

Member since 11 January 2024 01:15

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Last activity 11 January 2024 01:20

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Activity overview

Latest activity by Former User of DNAx Community_97

Former User of DNAx Community_97 created a post, 02 March 2023 00:00
How can I store files that aren't automatically deleted upon expiration of my Jupyter Notebook session?
- Former User of DNAx Community_97
- 02 March 2023 00:00
- 1 follower
- 1 comment
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Former User of DNAx Community_97 commented, 14 December 2022 15:34
I don't think it really solves the fundamental problem. In the end I'll want to run the same analysis genomewide. I can in principle write my own VCF parser that reads the file line by line and tha...
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- 14 December 2022 15:34
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Former User of DNAx Community_97 commented, 14 December 2022 01:01
Thank you for the suggestions! I want to perform a rather specific custom analysis, not something that falls into an existing pipeline (such as GWAS). For a start, I'd like to extract the genotypes...
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- 14 December 2022 01:01
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Former User of DNAx Community_97 created a post, 13 December 2022 00:00
How to read the UKB exome data from Python?

I've tried to run the pipeline described in this notebook.The problem is that it's super slow - not just when loading the data, but on every single operation. For example, each time I run mt.descri...
- Former User of DNAx Community_97
- 13 December 2022 00:00
- 3 followers
- 6 comments
- 0 votes