Bethan Data Analyst
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Recent activity by Bethan
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Hi Hanbin Lu, For questions on costs within the UKB-RAP, we advise getting in touch with DNAnexus support directly to provide you with further advice on your personal billing. You can get in touch ...
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Hello Scott,You might be particularly interested in seeing the A110 notebook on the UK Biobank Github, which walks you through how to use table exporter in RStudio:https://github.com/UK-Biobank/UKB...
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Hi Astrid Filt , thanks so much for your question! You're off to a great start. Finding the ec2 address can cause a little bit of confusion, since it can take a bit of time for ‘host’ to appear wh...
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If you are experiencing issues, please refer to the troubleshooting steps below.1. Trouble Starting a Cloud WorkstationEnsure you have the latest version of the DNAnexus (dx) toolkit installed.2. T...
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Hello Asako!Please see the schematic in resource 4654 (Section 6) on the Showcase website for information on the Olink proteomics datasets. Additionally, Notebook A108 provides an example of how to...
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Hi Annemieke!Thank you for your question. Can you please let us know whereabouts you have this R script saved? Please note that if you are running a new R studio session, you will need to have uplo...
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Hello Roberto!Thank you for posting your question on the community.dx upload usually does not overwrite files, so you might get duplicated files of the same name. Please see the dx upload documenta...
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Hi Lei!Thank you for your community forum post.Yes, all four imaging sites (Cheadle, Reading, Bristol and Newcastle) used the same scanner device throughout the data collection process. You may be ...
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Hello Annemieke, Please see this subsection from the Imaging Data article on the community forum: "For a more hands-on approach at image analysis, open-source tools such as FSL and FreeSurfer can b...
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The FreeSurfer-derived IDPs and the FAST-derived IDPs use different atlases and modelling tools to obtain Regions of Interest (ROIs), which may lead to variations and differences in brain region cl...
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