Installing qqman on RStudio workbench

Hayley Jane Power

Has anyone tried to install qqman in RStudio?

install.packages('qqman')

When I try I get this error:

Installing package into ‘/home/rstudio-server/R/x86_64-pc-linux-gnu-library/4.4’ (as ‘lib’ is unspecified) trying URL 'https://packagemanager.rstudio.com/cran/__linux__/jammy/latest/src/contrib/qqman_0.1.9.tar.gz' Content type 'binary/octet-stream' length 1130992 bytes (1.1 MB) ================================================== downloaded 1.1 MB Error: C stack usage  7970084 is too close to the limit Execution halted Warning in install.packages :  installation of package ‘qqman’ had non-zero exit status The downloaded source packages are in ‘/tmp/Rtmp8aKg4p/downloaded_packages’

Comments

2 comments

Date Votes
  • Comment author
    Rachael W The helpers that keep the community running smoothly. UKB Community team Data Analyst
    • Edited

    Hi Hayley,

    from the error message it looks like you might be running out of memory.  I suggest you try using a larger worker instance for RStudio, which can be set as you start RStudio, like this

    Where this shows the default instance type.   I don't know if you need more “storage” or more “memory”,  but the next option in the list has more of both, so give it a go.

    1
  • Comment author
    Yuling Ba

    More storage alone won’t solve the problem.


     

    0

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