Rachael W UKB Community team Data Analyst

This repo might be useful (I haven't tested it yet):https://github.com/lcpilling/ukbrapR

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• 01 October 2025 18:41
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Hi Scott,have you considered using a JupyterLab R notebook instead of a Posit R session?  You would then be able to use Spark commands to interact with the tabular data in the Parquet database.  Th...

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• 14 September 2025 13:10
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Hi Eric, if you select Tools - JupyterLab you should get a list of jupyterlab jobs, with a Status column, like this If you go back to the main projects page, and select the Monitor tab, you will ge...

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• Edited 14 September 2025 12:51
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Hi Rhiannon,As you say, field 30038 should have reached the Main UKB-RAP Copy of the data in March 2025.   If your UKB-RAP project was initially dispensed before March 2025, then you might need to ...

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• Edited 14 September 2025 12:40
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Hi Ilakya,Firstly, please check whether “Exome OQFE CRAM Files” is a subfolder within “Exome Sequences”.Refresh and Re-Dispense are not currently possible for any projects, probably for the whole o...

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• 22 August 2025 09:42
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Hi Ilakya,the suggestion has not been implemented, so users will still need to perform the liftover themselves.

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• 08 August 2025 16:02
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Category 205 Sleep data is now available on the UKB-RAP.  When a project is dispensed, it receives a copy of the data that is in the Main UKB-RAP Copy at the time of dispense.   If your project is ...

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• Edited 05 August 2025 14:45
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Hi Jun Yuan,UK Biobank has Whole Genome Sequencing (WGS) , Whole Exome Sequencing (WES) and the older Genotyping data.Please see these articles https://community.ukbiobank.ac.uk/hc/en-gb/articles/2...

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• 01 August 2025 14:02
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Hi Yibo,Firstly, please note that UKB does not hold a “complete list of participant medication”.   Data on regular medications is gathered when a participant attends a UKB assessment centre, but th...

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• Edited 30 July 2025 07:40
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Hi Dennis,I agree with you, and thanks for raising it.DNAnexus Support report that it is now fixed, and the yellow message has disappeared for me.   Please post again if you are still seeing the ye...

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• 28 July 2025 08:54
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