Chai Fungtammasan DNAnexus Team
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Recent activity by Chai Fungtammasan
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@Yong Qian? The corrupted data is now replaced with the valid data in our latest 13.1 data release. You can refresh the project to get them. See https://community.dnanexus.com/s/question/0D5t000004...
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Could you post new question in a separate thread, so other community member could be benefit from similar question?
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I think it would be good to watch those tutorial videos I sent over meanwhile. This way, you can have a quick start once data is available. It would probably take 10-15 before you get the data.
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It's dispensing, so best recommendation is to wait.
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Can you check setting page? If the "status" said "ready", it means no data is dispensing. If it says that dispensing is 0% or different number, then data will be added. See more info here: https://...
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The cohort browser only have the WES variant data. To access WGS data or WES CRAM data, you would need to access them via Bulk folder. For tutorial, check out this short video for cohort browser h...
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@Pierre LIndenbaum? I discussed with product team and the advance nextflow support would require more than just flip the permission flag. There will need to be discussion at strategic level and als...
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Sorry, I made a mistake with my latest answer. You are the first RAP user that wants to use Nextflow, and we have some miscommunication internally. Let me try again: There are two levels of Nextf...
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There are two levels of Nextflow support on DNAnexus. 1 Basic support that wraps everything in an applet https://ukbiobank.dnanexus.com/app/nextflow_pipeline_importer2 Advance support that supports...
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Swiss-army-knife is versatile and a good start, but if you want to handle large scale data effectively, it might be useful to develop applet to handle this data specifically. See an example here: ...
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