Chai Fungtammasan DNAnexus Team
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Recent activity by Chai Fungtammasan
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I have shared this feedback/suggestion to our solution owner for future planning. Thank you for the suggestion. Currently, there is no direct method to access returned data in RAP. However, if you ...
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@Steven Lehrer? bcftools inside swiss-army-knife would be a good start. If you have a question that is different from the main one, you may create a new question thread in the future. This would ma...
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For what we know so far, it will be in PLINK2, but there will be more discussion if BGEN or PLINK would also be available. I expect that at minimum it would be pVCF and PLINK2.I have forward your f...
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Let me discuss with product team and UKB on this to see what is feasible on their end.
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I think you are downloading results to the same folder that contain your chr22 results. When your bash see the *.gz, it expand to your chr22*.gz files and try to download just that. You can try dx ...
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I would need to ask UKB and they might need to negotiate with data providder. Would you think that either PLINK or BGEN would be good enough for this case? That's what we have for WES.
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Are you asking if the file containing multiple allele or are you implying that there is an issue with data?
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That is a default limit for how many worker each user can use at a given time to protect users from accidentally spend lots of money by mistake. You can contact ukbiobank-support@dnanexus.com to in...
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Note that there is also a tutorial in our webinar on how to handle large number of job. I set the video to start on this topic. https://youtu.be/U8QZAGwnUm0?t=1753
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