Chai Fungtammasan DNAnexus Team
Comments
Recent activity by Chai Fungtammasan
-
The /Bulk/Whole genome sequences/Whole genome GraphTyper joint call pVCF/ is appropriate. It's just that it came from 150k rather than all current 200k WGS. See all future release dates here. https...
- View comment
- 0 votes
-
@Barney Hill? has developed the custom version of it here with latest Hail. https://github.com/lindgrengroup/hail-on-dnanexus see the discussion thread: https://community.dnanexus.com/s/question/0D...
- View comment
- 0 votes
-
Unfortunately, this is not possible by design. You would have to explicitly remove the file yourself. It was create this way for two reasons. One is to reserve provenience of data operation until y...
- View comment
- 0 votes
-
For this, you might want to contact the author of the tool. He is also using the community, but using github issue might be a better way to track request for feature improvement.
- View comment
- 0 votes
-
What is the genotype data you plan to transfer over?
- View comment
- 0 votes
-
I don't know the answer for this, but you may be interested to reach out to genomics PLC who generated this data and checkout their github https://github.com/Genomicsplc/ukb-pret
- View comment
- 0 votes
-
@Lara Brown? we can't do much without seeing log of the job. I recommend that you contact ukbiobank-support@dnanexus.com for help.
- View comment
- 0 votes
-
There is no option to stop dispensal or refresh. Did you receive one of our target Email mentioning that you should remove this particular project? Those projects are pretty much in dead stage. The...
- View comment
- 0 votes
-
Could you post this as a new question to make it easier for community member to search for similar question?
- View comment
- 0 votes
-
The file viewer only show the first part of the file. You can run ttyd and check the rest of content. It might be possible for vcf to be empty though. You can guess based on file size or use ttyd t...
- View comment
- 0 votes