Ondrej Klempir DNAnexus Team
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Recent activity by Ondrej Klempir
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Hello @Isaac Bishof?, have you tried to change the instance type of your job and get more memory? You can select from the list of instance types. Rate card is here: https://20779781.fs1.hubspotuser...
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Hello @Burcu Çevik?, if I understand this correctly, this is question more about how to format/rename columns in your dataframe/table to have better representation (or "human readable" if you will)...
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You can contact ukbiobank-support@dnanexus.com.
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I was super interested to know how to do this! So I consulted this with DNAnexus dxCompiler experts and this is their answer (I like it!): In a job log look for the following line:java -jar /dxExec...
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According to the rate card, it really seems you were running the Swiss Army Knife on-demand. I usually set up the priority of my jobs in GUI of the app. For SAK, it would be: So theoretically here,...
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What was the number of nodes you started the cluster with and the exact error message?
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These types of issues might be caused by introducing some custom made settings to the vep.json file. https://documentation.dnanexus.com/user/jupyter-notebooks/dxjupyterlab-spark-cluster#using-vep-w...
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Similarly for the exported svg file format, I just changed the "png" in path to "svg" and svg is loaded:
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An easy way would be to split/recompile your workflow into two workflows/apps, run the first just once and reuse the results later multiple times. I would check the official supported features cal...
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Why you need to upload and then download the files? I am wondering whether the following is something you are looking for: require("ggplot2")#some sample datahead(diamonds) #to see actually what wi...
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