Whole Exome Sequencing
-
Public project with example WES data?
- Dr. Mc. Ninja
- Edited
-
Information about ukb23158_500k_OQFE.90pct10dp_qc_variants.txt helper file
- Anushka Sinha
-
Whole Exome Variant Annotations
- Anushka Sinha
-
Batch Effects for Whole Exome Sequencing Data
- Anushka Sinha
-
Store Hail MT from WES data to DNAX
- Ning Li
-
What is UKB_3711358_302261298 in Example WES variant call file?
- Ashwin Lakshman Koppayi
-
If UKB no longer provides exome data in CRAM format, how can somatic mutations be identified and filtered?
- Lei Ding
-
Where can I find the CRAM files of exome in the RAP platform?
- Lei Ding
-
SAK: bcftools batch job error with reference loading for pVCFs
- Laura Chegwidden
-
GLnexus error message
- Zeid Kuzbari
-
Using Batch Files in Swiss Army Knife for Mutect2 Pipeline
- Nicole Powell
-
Discrepancies between 200K and 270K WES datasets and with WGS data
- David Curtis
-
Missing Loftee annotations when running with Hail
- James Harrison
-
some questions about the Whole exome sequencing analysis(variants filtering)
- Yaying Sun
-
PLEASE!!How can I perform association test(GWAS) by using WES data in a pVCF?
- Yaying Sun
-
Low predictive performance on WES
- Nora Verplaetse
-
Burden test error in ukb23158_500k_OQFE.sets.txt.gz
- Elham Alhathli
-
Mutectcaller continues to fail when I try to call somatic mutation. Can you help me to resolve this error?
- Xi Li
-
bcftools - VCF parse error
- Myvizhi Esai Selvan
-
Decreasing Run/Time Cost in WES Variant QC
- Mauricio Garcia
-
A variant from a UKB case in gnomAD is missing from the UKB VCF file
- Arezoo Mohajeri
-
What does a manifest txt looks like in DNAnexus analysis?
- Lei Xiao
- Edited
-
ANNOVAR in UKB-RAP
- Lynette Sylvia Graver
-
Number of sites removed by ukb23158_500k_OQFE.90pct10dp_qc_variants.txt
- Bastien Rioux
-
Male heterozygotes on X chromosome
- Bastien Rioux
-
Burden test from regenie in UKB WES data; the result does not contain Alleles or BETA and SE
- Former User of DNAx Community_21
-
Is there a map for which regions are in each 500k Whole EXOME Sequencing final release pVCF (23157) block and for the alternative gnoMAD pVCF (24068)?
- Former User of DNAx Community_94
-
How can I extract AD, AF, DP information from ##FORMAT lines of snpEff.vcf file?
- Permanently deleted user
-
Recommendations for understanding WES pVCF file data in detail
- Former User of DNAx Community_78
-
Running HAIL-based SampleQC Script in JupyterLab
- Former User of DNAx Community_82
Didn't find what you were looking for?
New post