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#CheadleDA UK Biobank Data Analysts The helpers that keep the community running smoothly. UKB Community team Data Analyst

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Recent activity by #CheadleDA UK Biobank Data Analysts

  • Why is data missing from my UKB-RAP project?

    There can be various reasons for this: The data dispensed will depend on the Access Management System (AMS) Application Tier of the project. Cost Tier 3 data, such as the Whole Genome Sequencing,...

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    • 1 follower
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    • -2 votes

  • Why are there several fields for one disease?

    At assessment centres, participants answer questions about illnesses they have had before the visit. This self-report data is typically stored in fields 20002 and 20001. However, separate fields ca...

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    • 1 follower
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    • -2 votes

  • What is the difference between ICD 9 and ICD 10 data?

    UK Biobank (UKB) receives linked health-related outcomes data from the Cancer Registry, NHS Digital (Hospital Episode Statistics), Death Registry and Primary Care (GP) providers. Some of the hospit...

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    • 1 follower
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    • -1 votes

  • UKB-RAP resources and documentation

    The UK Biobank Research Analysis Platform (UKB-RAP), which can be accessed here, is an informatics platform which allows its registered users access to UK Biobank data. It is hosted by our partners...

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    • 5 followers
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    • 1 vote

  • Why does the number of participants not match between Showcase and the UKB-RAP?

      There are two main reasons for a difference in participant counts for a field:   1.     Showcase is regularly augmented with new data.   After being uploaded to Showcase, new data is added into t...

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  • What is an instance index?

    Disambiguation A JupyterLab instance or a batch job instance is a set of compute resources (processors and storage) and is  not related to an instance index.   For more on JupyterLab instances plea...

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    • 3 followers
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    • 4 votes

  • Is there a data dictionary?

    The Showcase Website Metadata and further information about each field can be found in the UK Biobank (UKB) Showcase page for that field. If you Search in Showcase for a field number or a keyword, ...

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    • 1 follower
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    • 3 votes

  • ML-Corrected DRAGEN whole genome sequencing (WGS) release

    This updated ML-corrected version of the DRAGEN WGS data contains the results of DRAGEN cohort level variant filtering and format conversion with the original DRAGEN pVCFs (Field 24310) as input. T...

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    • 1 follower
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    • 2 votes

  • UK Biobank GitHub notebooks

    UK Biobank provides a range of resources, including example notebooks and comprehensive guides, to help researchers understand how to use the UK Biobank Research Analysis Platform (UKB-RAP).The UK ...

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    • 3 followers
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    • 0 votes

  • Health-related outcomes data

    Collecting data Information about health outcomes in UK Biobank comes from various places, including: 1. Self-reported data collected at the UK Biobank assessment centre visits 2. Linkage to electr...

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    • 5 followers
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    • 5 votes