Former User of DNAx Community_10

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• How can I estimate the recombination frequency of these 2 genes rs73182688 NLGN1 3q26.31 depression rs1501299 ADIPOQ 3q27.3 G>T BMI

  • 12 October 2023 00:00
  • 1 follower
  • 1 comment
  • 0 votes

• I am trying to extract a specific snip from ukb22418_cMT_b0_v2 the mitochondrial hard called chromosome file, The snps are labeled with Affx-, not rs... How do I extract a specific snp, for example Affx-34461959. The usual plink command doesn't work

  • 19 June 2023 00:00
  • 2 followers
  • 2 comments
  • 0 votes

• mitochondrial DNA copy number (CN) estimation--how do I do it?

  • 25 May 2023 00:00
  • 1 follower
  • 1 comment
  • 0 votes

• Using PLINK GWAS tool on the RAP generates a text output file with many duplicates. How do I get rid of the duplicates?

  • 10 October 2022 00:00
  • 2 followers
  • 3 comments
  • 0 votes

• I used RAP tool to do a PLINK GWAS but results did not include X or XY files, only 22 autosomes. How do I include X and XY chr files.

  • 07 October 2022 00:00
  • 1 follower
  • 1 comment
  • 0 votes

• I want to locate the pVCF UKB23352_c19 file that has position chr19:17642033-17642056. There are 1000 files. How do I do it?

  • 10 April 2022 00:00
  • 2 followers
  • 6 comments
  • 0 votes

• How can I identify which subjects have which alleles of rs56041637 in the WGS data? rs56041637 is an intron variant not in the imputed snps. https://www.ncbi.nlm.nih.gov/snp/rs56041637

  • 05 April 2022 00:00
  • 2 followers
  • 8 comments
  • 0 votes