Former User of DNAx Community_21
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Recent activity by Former User of DNAx Community_21
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CalledProcessError: Command '['/opt/notebooks/bgen.tgz/build/apps/bgenix', '-g', 'imputed/ukb21008_c1_b0_v1.bgen', '-incl-rsids', 'rs74045046']' returned non-zero exit status 255.
Hi, I was trying to perform phewas for my data in ukb rap. I was following: https://github.com/dnanexus/UKB_RAP/blob/main/end_to_end_gwas_phewas/get-phewas-data.ipynb I am getting the above-men...
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Burden test from regenie in UKB WES data; the result does not contain Alleles or BETA and SE
Hi,I was trying to burden test in WES using dx and swiss army knife using the following code:for i in {1..22}; do run_regenie_burden="regenie \ --step 2 --pred fit_snps_chr${i}_pred.list \ --bge...
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