Jonny James Else
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Latest activity by Jonny James Else
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Jonny James Else commented,
Hi Rachael,I had seen them but they are gvcfs that haven't been joint called. Do i need to run these through the rest of GATK pipeline (eg GenotypeGVCFs, VQSR etc) to get similar results to the pvc...
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Jonny James Else created a post,
Extracting group of samples from 500K WGS pvcf files
Hi,I need to extract a small (~1000) group of samples from the joint called pvcf files (Data-Field 23374) for the 500K WGS data. There are about 150K segments of the pvcfs, so its v slow and expens...
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