John J Farrell
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Latest activity by John J Farrell
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John J Farrell created a post,
Request to compress and index WGS pvar files
To minimize IO and storage costs and compute time for processing UK Biobank WGS and WES plink2 files, could UK Biobank compress the plink2 pvar files with bgzip and indexed with tabix. Besides the...
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John J Farrell commented,
There is a plink version of the 500k WGS data available now in pgen format. If it makes sense, maybe migrate the analyses from the imputed data to the WGS plink datasets.
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