Arezoo Mohajeri
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Latest activity by Arezoo Mohajeri
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Arezoo Mohajeri commented,
Thank you so much, Rachel!
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Arezoo Mohajeri commented,
Thank you, Rachael! What about the following command? dx find data --property eid=1234567Doesn't this extract all the information or only the files in Bulk? It seems that the information in the Dat...
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Arezoo Mohajeri created a post,
How to extract all the phenotypes available for a single individual
Hello. I am wondering if it is possible to extract all the phenotype information available for an individual in one command?
- Arezoo Mohajeri
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Arezoo Mohajeri created a post,
This job has been restarted due to SpotInstanceInterruption from running this job
I encounter the error 'This job has been restarted due to SpotInstanceInterruption from running this job' when I attempt to run more than 20 jobs simultaneously. I understand that this error is rel...
- Arezoo Mohajeri
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Arezoo Mohajeri commented,
Thanks. I created a new project and searched in the genome pVCF files and found the variant. Not sure why it's not in the exome data but I have the individual ID now. Are individual IDs the same be...
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Arezoo Mohajeri commented,
Thank you so much for the response. It makes sense that the participant has both exome and genome. I looked for the variant in the RAP cohort browser, but it was absent. Just to confirm, does the R...
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Arezoo Mohajeri commented,
Thank you very much! This is information is very helpful. Based on your response, the individual with the variant in the UKB browser (the genome data), is not the same individual who has the varian...
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Arezoo Mohajeri commented,
Thank you for your response and sharing the link to the browser. The GnomAD browser and gnomAD VCF files both clearly indicate if a variant is non-UKB. Although they don't directly specify if varia...
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Arezoo Mohajeri created a post,
A variant from a UKB case in gnomAD is missing from the UKB VCF file
I have a variant that has allele count of 2 in gnomAD, 1 one which is a UKB exome case. I looked up the variant in the corresponding VCF file and folder (Population level exome OQFE variants, pVCF ...
- Arezoo Mohajeri
- 2 followers
- 10 comments
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