Most analytical pipelines can be replicated in the UK Biobank Researcher Analysis Platform (UKB-RAP). Here are links to further information about running pipelines provided by DNAnexus:
You can also gain help and support from UK Biobank and other researchers here through the UK Biobank Forum. Simply use your AMS credentials to login if you'd like to ask a question or Submit a Request to contact the UK Biobank Researcher Enablement Team.
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