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  1. UK Biobank
  2. Analyse on UKB-RAP
  3. Tools and workflows

Tools and workflows

  • Working with apps using dx run
  • Installing tools and dependencies on UKB-RAP
  • Running Docker images with the Swiss Army Knife GUI on the UKB-RAP
  • Using files and apps with Command Line Interface (CLI)
  • Advanced Workflow Description Language (WDL) Concepts and Docker
  • Introduction to Workflow Description Language (WDL)
  • Understanding cloud computing, virtual machines and instances
  • UKB-RAP resources and documentation
  • UK Biobank GitHub notebooks
  • Pre-loaded software in the UKB-RAP
  • Working with Jupyter Notebooks
  • What tools are available on the UKB-RAP?
  • Working with PLINK2 fields
  • How do I transition my project from downloaded data to UKB-RAP?
  • Deleting user data from a UKB-RAP project
  • Can statistical software be imported into the UKB-RAP?
  • How do I use my local pipeline in the UKB-RAP?
  • Can external data be imported into the UKB-RAP?
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