How can I get the protein field names for all 2923 proteins in the new Olink dataset?

before, you guys posted a field_names.txt file for the ~1500 proteins that were released first. is there a similar list somewhere else? thanks!

Comments

4 comments

  • Comment author
    Rachael W The helpers that keep the community running smoothly. UKB Community team Data Analyst

    Hi Elias, please try coding143 from Showcase, https://biobank.ndph.ox.ac.uk/showcase/coding.cgi?id=143

     

    (It may be in the RAP too as a helper file, but I don't know where).

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  • Comment author
    Former User of DNAx Community_9

    perfect thank you. as far as generating the fields for use with table exporter, i should probably remove everything from the semicolon onwards per protein so its just the uniprot symbol. and should they also be lowercase? that was the way the field names were in the last RAP information session

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  • Comment author
    Former User of DNAx Community_9

    so i had to fiddle with it a little more and replace dashes with underscores, so i figured id upload this in case any one else needs it. should work with table exporter olink instance 0.

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  • Comment author
    Former User of DNAx Community_22

    Thanks a bunch for this, @Elias Scheer? ! Was just looking for it on RAP and in showcase.

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