Date: Thursday December 9th, 4pm GMT/8am PST
Register here: https://dnanexus.zoom.us/webinar/register/9216342506637/WN_UCTZokzqS2G-sX4w23Uqgg
DNAnexus experts give you an introduction to the applet and workflow development process by building a simple project that will work on Bulk files on RAP.
This includes:
- Introduction to the Applet and Workflow Development Process
- How to build & run your own Applet using CLI
- How to build & run using Command Line Interface and Platform UI
- Customizing the software environment of your applet
- Building applets and deploy them in a RAP project
Hi Arezoo - The link is a direct download link of the PDF - check your downloads folder. Unfortunately, I can't control how Github handles downloads on a release page.
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Hi Ted, Are you sure that the link exists because I can't find any folder named "best_practices_dnanexus" on your Github page. When I click on the link or try to download it with "wget" I get the following error:
Connecting to github.com (github.com)|140.82.113.4|:443... connected.
HTTP request sent, awaiting response... 404 Not Found
Hello, I have a question. I am trying to create an applet and would like to know how to add additional parameters that are required for the applet to give. Like additional options that are needed for the applet to run?
Comments
12 comments
The session is now available on demand: https://www.youtube.com/watch?v=A_iki_50Ig0
Presentation slides are also available for download: https://go.dnanexus.com/l/457982/2021-12-09/7zv23n/457982/16390733980BwTQezz/How_to_Create_an_App_Workflow_Bring_your_Own_Tools_to_the_UK_Biobank_D.pdf
Hi Everyone,
App Building Cheatsheet is now available here (PDF, will trigger a download)
Hello, the link gives an error, maybe because it has been 2 years since the initial upload. Could you re-upload the file?
Thank you for flagging the error, file can be found here: https://github.com/laderast/best_practices_dnanexus/releases/download/v1.0.0/310R-app-building-cheatsheet.pdf
Thanks for sharing the link. The link still doesn't work.
Hi Arezoo - The link is a direct download link of the PDF - check your downloads folder. Unfortunately, I can't control how Github handles downloads on a release page.
Hi Ted, Are you sure that the link exists because I can't find any folder named "best_practices_dnanexus" on your Github page. When I click on the link or try to download it with "wget" I get the following error:
Connecting to github.com (github.com)|140.82.113.4|:443... connected.
HTTP request sent, awaiting response... 404 Not Found
2023-09-13 11:07:32 ERROR 404: Not Found.
My Bad. That repository was private - I've made it public. I hope it works now
Perfect. It worked. Thank you!
Great. Hope it's helpful.
Hello, I have a question. I am trying to create an applet and would like to know how to add additional parameters that are required for the applet to give. Like additional options that are needed for the applet to run?
You can get some inspiration about how to specify additional input parameters at this doc page: https://documentation.dnanexus.com/developer/apps/advanced-app-tutorial
More specifically, two examples are mentioned in section: https://documentation.dnanexus.com/developer/apps/advanced-app-tutorial#step-2.-create-the-dxapp.json-file
and it can be specified via dxapp.json
See also example applets at DNAnexus github page: https://github.com/dnanexus/dnanexus-example-applets
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