Or can you suggest a quick way to extract this information? This would be useful for people who only want to look at variants in particular genes for example.
Hello, based on your request our team generated helper CSV file containing chromosome, first coordinate and last coordinate. Please contact support team (ukbiobank-support@dnanexus.com) to request it.
@Joe Dennis? The file qc_metrics_graphtyper_v2.7.1_qc.tab.gz would have the column "contig" and "POS" for the variants that you need and the "region" column indicating which region those variants belong to. You can use that information to figure out which files among all the pVCF file have the range that you need.
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Hello, based on your request our team generated helper CSV file containing chromosome, first coordinate and last coordinate. Please contact support team (ukbiobank-support@dnanexus.com) to request it.
@Joe Dennis? The file qc_metrics_graphtyper_v2.7.1_qc.tab.gz would have the column "contig" and "POS" for the variants that you need and the "region" column indicating which region those variants belong to. You can use that information to figure out which files among all the pVCF file have the range that you need.
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