Rachael W
UKB Community team
Data Analyst
Comments
Recent activity by Rachael W
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Hi Eric,that is a very good question, and you have found an error in the data. Thank you for informing us. We will investigate further and fix it.In the meantime, please do not use the “i4” value...
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Hi Eric,there is a file called field.txt with columns including field_id and instance_id that relate the field number to the instancing id. This file is downloadable from Showcase (it doesn't incl...
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Hi Julia,There is no charge for storing UK Biobank data that has been dispensed to a project, thanks to the generous support of Amazon Web Services (AWS). See https://www.ukbiobank.ac.uk/use-our-...
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Hi Ryo,we are still investigating the cause of this issue, which is affecting other research projects, not just yours. We will provide an update when we know more.
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Hi Kenneth,there are some dx toolkit commands that can be used to copy data from your main project storage to your jupyterlab instance storage. See https://documentation.dnanexus.com/user/helpstri...
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Hi Bhawana,thank you for letting us know (that information might help somebody else if they read this thread).I haven't seen that particular issue before. There can be formatting problems if text ...
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Hi David,see the UKB allele frequency browser, which is based on the WGS and shows VEP annotations, https://afb.ukbiobank.ac.uk/
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Hi Bhawana,I haven't tested this, but you could try either including the filepath for the file or using the record-id for the file.
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Hi Bhawana,By default, the query output is written to the log. You can send it to a file by using the flag --output filename.csvsee https://samtools.github.io/bcftools/bcftools.html#query Thank yo...
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Hi Shiyu,If you are still seeing the same error, please try clearing your browser cache. If that doesn't help, please contact the platform providers directly, ukbiobank-support@dnanexus.com Includ...
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