Chai Fungtammasan DNAnexus Team
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Recent activity by Chai Fungtammasan
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Do you have the estimate of when this will be released?
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Thank you for the feedback. I sent this note directly to the lead product manager. I will leave this thread open in case anyone has workaround, but we will try to follow up to make sure this will b...
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You don't need dxfuse for your local computer. The dxfuse is only for the worker to see file system in RAP project. I think macFUSE is a different thing and not related to dxfuse.On local computer,...
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I understood that this is error with tabix command. For example, I would use -p vcf since default is format gff. See the manual here http://www.htslib.org/doc/tabix.htmlMaybe you can try to run in...
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thanks for this note Phil. I will pass on this request to UKB.
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Would the note and resource section of https://biobank.ndph.ox.ac.uk/showcase/field.cgi?id=21007 contain information you are looking for?
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Could you repost this as a new question? It's pretty hard questions, so I want to see if other members in community could chime in. I want to note though that there will be phasing WGS data coming ...
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You are welcome. If you are interested in phasing data, you may find this two talks useful.https://www.youtube.com/watch?v=jF2GKfrWaz4&t=8shttps://www.youtube.com/watch?v=iNtg9PuYj4g&t=1s
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Yes, in this example, you can use jupyter notebook to process them. See tutorial on how to run jupyter notebook on UKB-RAP here https://www.youtube.com/watch?v=YIPdhf3qbQA&list=PLRkZ0Fz-n3Z7Jg0Vz4v...
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The TOPMed and GEL data need to be analyzed on UKB-RAP only per the MTA, so could not download data from Showcase.
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