Anushka Sinha
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Latest activity by Anushka Sinha
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Anushka Sinha commented,
Thank you Dr. Mc. Ninja for the helpful information!
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Anushka Sinha commented,
Hi Bastien,Thanks for sharing these numbers! I was wondering—does this file contain low-quality variants that were filtered out, or does it include the high-quality variants that passed QC? I want ...
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Anushka Sinha created a post,
Information about ukb23158_500k_OQFE.90pct10dp_qc_variants.txt helper file
Does anyone know if the helper file ukb23158_500k_OQFE.90pct10dp_qc_variants.txt contains variants that passed quality control or failed? Thanks!
- Anushka Sinha
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Anushka Sinha created a post,
Whole Exome Variant Annotations
Hi everyone,I’m working with UKB whole exome sequencing data and using the provided snpEff annotations in the helper files, but I noticed they don’t include amino acid changes for the variants.Has ...
- Anushka Sinha
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Anushka Sinha created a post,
Batch Effects for Whole Exome Sequencing Data
Hello, I was wondering which field number on ukb showcase contains the batch effects for Whole Exome Sequencing Data. I only found batch effects for genotyping array data which was Field 22000. Tha...
- Anushka Sinha
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