Lucy BG
UKB Community team
Data Analyst
Activity overview
Latest activity by Lucy BG
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Lucy BG commented,
Hi Martin,UK Biobank doesn't hold any tumor or pathology samples. Biological samples are collected from participants at specific visits to the UK Biobank clinics only. Details on the exact biologic...
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Lucy BG commented,
Hi Yong,We have two articles on the DRAGEN datasets released which may assist you in understanding the steps taken to prepare the data, the filters applied, and how best to use it in your current w...
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Lucy BG commented,
Hi Youjie,We have two articles on the DRAGEN datasets released which may assist you in understanding the steps taken to prepare the data, the filters applied, and how best to use it in your current...
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Lucy BG commented,
Hi Ruby,We have two articles on the DRAGEN datasets released which may assist you in understanding the steps taken to prepare the data, the filters applied, and how best to use it in your current w...
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Lucy BG commented,
Hi Chao,Participant IDs are consistent between different data releases within the same UK Biobank project, but they are different between UK Biobank projects. Could you confirm that you are using t...
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Lucy BG commented,
The UK Biobank GitHub has some example code for running a basic ExWAS, and other tutorials for data manipulation ahead of ExWAS or GWAS: https://github.com/UK-Biobank/UKB-RAP-NotebooksThis may give...
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Lucy BG created a post,
Quality control and metrics
As part of the whole genome sequencing (WGS) release, a large number of quality control (QC) and metadata metrics have been released (Category 187). These build on those made available with the 200...
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- 2 votes
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Lucy BG commented,
1 - The 100m grid coordinate data is released on a separate application, and is not added to your standard application. We recommend if you intend to access this you contact the Access team directl...
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Lucy BG commented,
For 1km resolution, please email access@ukbiobank.ac.uk with your application number and the field IDs you wish to access. We will pass your request to our Data Analysts who can arrange for these f...
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Lucy BG commented,
Hi @Chinonso Odebeatu? , these will be participants who have withdrawn since you last dispensed your data. All researchers were very recently emailed a list of participants who have withdrawn for t...
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