Chai Fungtammasan DNAnexus Team
Comments
Recent activity by Chai Fungtammasan
-
#CheadleDA UK Biobank Data Analysts ?
- View comment
- 0 votes
-
@Gu An? It might also be more effective to ask ukbiobank-support@dnanexus.com since they could get access to your log file and project.
- View comment
- 0 votes
-
For this question, you might need to ask UKB.Note that you can analyze HLA typing directly in UKB-RAP though. If you can put your HLA typing tool in Docker, then you can run that on UKB-RAP. I did ...
- View comment
- 0 votes
-
I have another idea. Since UKB-RAP support workflow, you can make the workflow of two steps 1 table exporter and 2 Rscript wrapped inside a Docker or applet. This won't work for interactive explora...
- View comment
- 0 votes
-
What is your tier level of access(1,2,3) and type of data (WES/WGS) that you are looking into?
- View comment
- 0 votes
-
Thank you, Harry. This is very insightful. The complexity of this issue is not just for engineering work to make this happens, but also licensing with related parties including Rstudio if we have t...
- View comment
- 0 votes
-
Sure You could try this course in Kaggle. https://www.kaggle.com/learn/pandasYou need to learn first two lessons. There is also a course in Python too if you have no Python background.You would als...
- View comment
- 0 votes
-
I see. Thanks for confirming. One quick workaround is to remove header from VCF file and you would end up with tab delimited file. However, I personally won't recommend posting genetic data into e...
- View comment
- 0 votes
-
In that case, I'm afraid that there are no other solution than learning programming language. Both Python and R would be able to select only the data column you need.Since you can't download the da...
- View comment
- 0 votes
-
@Sai Zhang? This post elaborate more in detail how to do this.https://community.dnanexus.com/s/question/0D5t000004141fvCAA/hello-i-am-wondering-if-its-possible-to-input-a-script-into-swissarmyknife...
- View comment
- 0 votes