George F
UKB Community team
Data Analyst
Comments
Recent activity by George F
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This may be a result of participant withdrawals.
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Dear Taiki, You are correct. The eids in the joint call pVCF match the project EIDs. For individuals files only the filename is renamed to the match the EID. Hope this helps
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Chai Fungtammasan are you able to provide any guidance on this.
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Hi Annie,That is correct this field is the PC1-40 for each participant.The cohort browser is useful for an initial feel for the data. However, for further information and analysis we recommend expl...
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Dear Elby,This is not currently part of our future timelines but is something we will continue for our future prioritisation.In the meantime, please see if you are eligible for any of the credits a...
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Hi Zhengrong, I do not have enough information currently to help.Could you provide more info on what fields you used.ThanksGeorge
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Hi Andrew We do not have plans to release more versions of the DRAGEN WGS BGENs.Over to the community for advise on using HAIL.Hope this helps!George
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Hi Kent, It is possible to install samtools on your jupyterlab instance (similar to how bcftools was installed in this notebook: https://github.com/UK-Biobank/UKB-RAP-Notebooks-Genomics/blob/00dec2...
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Hi The time taken to launch JupyterLab will vary depending on the size of the instance launched and the usage at that time. There is currently no email notification alert available.If you are only ...
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Hi Gabriel, The Swiss-army-knife app contains plink2 and bcftools. You can use this to create a series of individual jobs or batch jobs, it can be launched wither interactively or from the command ...
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