UK Biobank Research Analysis Platform (UKB-RAP)

• Detailed guidance for users of Git based code repositories
• Repository Management Best Practices for Sensitive Data
• Guidance for using code repositories when working with UK Biobank data

• UKB-RAP resources and documentation
• Parallelising on UKB‑RAP: How to balance speed and cost
• Imaging tools on UKB-RAP
• Integrating External Data Sources with UK Biobank on the RAP
• JupyterLab with FSL and FreeSurfer
• Using MONAI on UKB-RAP

See all 18 articles

• Participant withdrawals on UKB-RAP
• Overview of the UK Biobank Research Analysis Platform (UKB‑RAP)
• Working with apps using dx run
• Installing tools and dependencies on UKB-RAP
• How to access returned data on UKB-RAP
• Running Docker images with the Swiss Army Knife GUI on the UKB-RAP

See all 31 articles

• Overview of the UK Biobank Research Analysis Platform - video overview
• Creating a workflow & customising your own tools on the UKB-RAP
• How to run tools
• Introduction to Command Line Interface (CLI)
• Introduction to Workflow Description Language (WDL)
• How to use RStudio workbench

• £40 Getting Started UKB-RAP Credits will expire on 14th July
• Financial support and credit programmes
• Wallets and billing on the UKB-RAP via DNAnexus
• How much does it cost to access UK Biobank data?
• How much will it cost me to use the UKB-RAP?
• Will I need to pay for storage of multiple copies of the data?

See all 9 articles

• Guidance on Data Downloads and Exemptions
• UK Biobank Exemption (from the UKB-RAP by default) Policy
• Applying for a data access exemption