• Unable to view cram files with pysam due to truncation error?

  • Sohaib Rumi Ansari
  • 28 March 2024 12:18
  • 0 votes
  • 0 comments

• Independent LD blocks in UK Biobank

  • Rima Mustafa
  • 26 March 2024 15:09
  • 0 votes
  • 0 comments

• Which RAP tools work natively with the segmentation of the genome into tiny chunks (with no index)

  • James Eales
  • 26 March 2024 00:23
  • 3 votes
  • 12 comments

• What does a manifest txt looks like in DNAnexus analysis?

  • Lei Xiao
  • Edited 24 March 2024 07:45
  • 0 votes
  • 2 comments

• GWAS Analysis Using pVCF Format Data

  • Yingzhou Shi
  • Edited 23 March 2024 16:33
  • 0 votes
  • 3 comments

• Ancestry-specific PCs

  • Saif Dababneh
  • 21 March 2024 18:10
  • 0 votes
  • 3 comments

• Cohort browser for Genomics

  • Kent Small
  • 20 March 2024 20:43
  • 0 votes
  • 9 comments

• Quality control and metrics Pinned

  • Lucy BG
  • 20 March 2024 16:27
  • 2 votes
  • 1 comment

• RStudio pre-installed packages

  • Lydia Kwee
  • 20 March 2024 14:52
  • 0 votes
  • 2 comments

• SAIGE group files

  • Andrew Anighoro
  • 18 March 2024 09:20
  • 0 votes
  • 2 comments

• Costs

  • Romina Gollan
  • 16 March 2024 09:20
  • 0 votes
  • 2 comments

• Reference genome for DRAGEN WGS 500k data?

  • Robin Mjelle
  • 15 March 2024 09:23
  • 0 votes
  • 5 comments

• Avoid data loos upon SpotInstanceInterruption

  • Robin Mjelle
  • Edited 15 March 2024 08:15
  • 0 votes
  • 1 comment

• Extract all phenotypic data within a category

  • Robin Mjelle
  • 14 March 2024 19:25
  • 1 vote
  • 1 comment

• reduced access fee

  • Junyi (Deb) Zhang
  • 12 March 2024 11:47
  • 1 vote
  • 2 comments

• How frequently are "low priority workstations" restarted

  • Fidel Alfaro Almagro
  • Edited 12 March 2024 10:26
  • 0 votes
  • 1 comment

• Parallel process multiple commands chromosome wise on swiss army knife

  • Priyatam Dutta
  • 07 March 2024 10:23
  • 0 votes
  • 1 comment

• Is it possible to dynamically input files in swiss-army-knife functions?

  • Hannah Louise Nicholls
  • Edited 06 March 2024 16:37
  • 0 votes
  • 3 comments

• WGS phasing

  • Andrew Anighoro
  • 04 March 2024 11:47
  • 0 votes
  • 4 comments

• WGS QC and list of variants

  • Andrew Anighoro
  • 04 March 2024 11:24
  • 0 votes
  • 1 comment

• VEP annotations

  • Andrew Anighoro
  • 29 February 2024 16:25
  • 1 vote
  • 5 comments

• Using WGS files with Hail

  • Andrew Anighoro
  • 29 February 2024 16:02
  • 0 votes
  • 12 comments

• How to resolve REGENIE errors with GEL and TOPmed BGEN indices

  • Mike
  • 28 February 2024 04:53
  • 2 votes
  • 1 comment

• Are there any RAP grants available to the student researchers with UKB access to run some analysis besides the introductory 40 pounds?

  • Sooyeon Lee
  • 28 February 2024 00:51
  • 0 votes
  • 1 comment

• Microsatellite sequences quality in UKBioBiank WGS

  • Marcin Wozniak
  • Edited 27 February 2024 07:21
  • 0 votes
  • 0 comments

• 500K WGS Batch Information

  • Yong Qian
  • 20 February 2024 14:48
  • 1 vote
  • 2 comments

• ANNOVAR in UKB-RAP

  • Lynette Sylvia Graver
  • 20 February 2024 09:57
  • 0 votes
  • 2 comments

• Number of sites removed by ukb23158_500k_OQFE.90pct10dp_qc_variants.txt

  • Bastien Rioux
  • 20 February 2024 09:36
  • 0 votes
  • 6 comments

• Male heterozygotes on X chromosome

  • Bastien Rioux
  • 20 February 2024 09:36
  • 0 votes
  • 2 comments

• Question regarding batches

  • Skh
  • 16 February 2024 10:13
  • 0 votes
  • 3 comments

Featured posts

• Ongoing closure of the UKB-RAP
• Our new cost calculator helps you plan with confidence
• New resources for using code repositories with UK Biobank
• Useful links to DNAnexus UKB-RAP resources