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Is it possible to include multiple bash scripts in a single applet?
- Former User of DNAx Community_10
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How can I get the protein field names for all 2923 proteins in the new Olink dataset?
- Former User of DNAx Community_9
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Version of the Annotation Database when running the snpEff tool
- Former User of DNAx Community_35
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Is there a way to access locally stored files in project from a submitted job without having to use "dx download"
- Former User of DNAx Community_14
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How to run an applet with a different machine?
- Former User of DNAx Community_10
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I would like to export a list of EIDs of people taking a specific medication list, e.g. aspirin and/or ibuprofen. What is the easiest way to do so from the platform please? And could I look both at gp scripts and also at questionnaire data?
- Former User of DNAx Community_81
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Polite inquiry about how to obtain the specific behavior pattern variables of accelerometry, such as the maximum daily sedentary bout length or the number of daily sedentary bouts?
- Former User of DNAx Community_75
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Does requesting access to the 1km grid coordinate data preclude access to the 100m grid coordinate data?
- Former User of DNAx Community_12
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where does the predictions of incident cases of various disease come from?
- Former User of DNAx Community_12
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Issue stopping the dispensing option
- Former User of DNAx Community_6
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New Data release on UKB-RAP: WGS Data from 500,000 Participants, Proteomics Data & Updated Imaging Data
- Brenton Pyle
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What is the latest status on the UKB data dispensal and refresh.? https://status.dnanexus.com/ shows that the platform upgrade supposed to be completed by November 20 and projects can be refreshed after that date.
- Former User of DNAx Community_72
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How can I get the processing date for alle the 2923 proteins?
- Former User of DNAx Community_56
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I am getting the following error when I try to run these lines in JupyterHub. Any help would be appreciated. sc = pyspark.SparkContext() spark = pyspark.sql.SparkSession(sc) RuntimeError: Java gateway process exited before sending its port number
- Former User of DNAx Community_11
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How long it takes to obtain access to the returned data via RAP? What is the procedure of applying for 100m/1km resolution grid data ?
- Former User of DNAx Community_12
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How to log all command outputs to the log file?
- Former User of DNAx Community_10
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How to view the job_error.json?
- Former User of DNAx Community_10
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Variants imputed or sequenced in BGEN file
- Former User of DNAx Community_13
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best fields for blood draw time stamps for proteomics and metabolomics?
- Former User of DNAx Community_6
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ttyd vs. cloud station. What is the main difference?
- Former User of DNAx Community_20
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Issue running bolt lmm
- Former User of DNAx Community_6
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Mismatch in Non-cancer illness code, self-reported (field ID 20002) and Non-cancer illness year/age first occurred (field ID 87)
- Former User of DNAx Community_33
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query cram files and collect EIDs
- Former User of DNAx Community_14
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Different DNAnexus URLs
- Permanently deleted user
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How can I find the common variants in my VCF files?
- Permanently deleted user
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CalledProcessError: Command '['/opt/notebooks/bgen.tgz/build/apps/bgenix', '-g', 'imputed/ukb21008_c1_b0_v1.bgen', '-incl-rsids', 'rs74045046']' returned non-zero exit status 255.
- Former User of DNAx Community_21
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File Storage Pricing
- Former User of DNAx Community_10
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index_bgen in RAP using imputation files
- Former User of DNAx Community_13
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How should I get allele frequencies for a specific cohort as per the WGS on the UKB RAP?
- Former User of DNAx Community_29
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Does anyone know how to access to returned data (i.e. UKB urban morphometric platform)? as a student researcher accessing all data via RAP
- Former User of DNAx Community_12
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